Colchester competed in the Third Division, the fourth tier of English football, after achieving promotion from the Conference the season prior.

As Colchester had achieved a non-League double, winning both trophies, they faced the second placed side from the previous campaign, Wycombe.

Chairman James Bowdidge stepped down from his role due to business commitments, and former reserve team player Gordon Parker took over.

Two major player departures occurred across the summer period, with ever-present goalkeeper Scott Barrett opting to join Gillingham on a free transfer, and Forward Mike Masters, who was unable to obtain a work permit.

Colchester were narrowly defeated in the first round of the League Cup, with Brighton & Hove Albion coming out on top 2–1 over two legs.