The 1998–99 Danish Cup was the 45th season of the Danish Cup, the highest football competition in Denmark.
[1] The final was played on 13 May 1999.
[2] *The match between Holbæk B&I and Skovshoved IF (2–3) was scored 3–0 for Holbæk due to the use of two Skovshoved players who were not eligible to play.