It was won by Kilwinning Rangers after they defeated Kelty Hearts 1–0 in the final.
These ties were scheduled to take place on Saturday, TBC.
The final took place on Sunday, 30 May 1999 at Firhill Stadium, home of Partick Thistle.
[1][2] Kilwinning Rangers won 1–0 with a goal from Gerry Peline only 80 seconds after the kick-off.
[3][4] A number of Scottish MPs tabled an Early Day Motion in Parliament congratulating Kilwinning on winning the Junior Cup and several other trophies during the season.