1999–2000 Hong Kong FA Cup was the 26th staging of the Hong Kong FA Cup.
It was competed by all of the 8 teams from Hong Kong First Division League.
The competition kicked off on 30 March 2000 and finished on 9 April with the final.
Happy Valley won the cup for the first time after beating Orient & Yee Hope Union by 7-2 in the final, the highest scoring final in the cup history.
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