The 1999 Bowling Green Falcons football team was an American football team that represented Bowling Green University in the Mid-American Conference (MAC) during the 1999 NCAA Division I-A football season.

In their ninth season under head coach Gary Blackney, the Falcons compiled a 5–6 record (3–5 against MAC opponents), finished in fifth place in the MAC East Division, and were outscored by all opponents by a combined total of 312 to 296.

[1] The team's statistical leaders included Ricky Schneider with 1,121 passing yards, Joe Alls with 592 rushing yards, and Kurt Gerling with 775 receiving yards.

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