His assistant Steve Thompson oversaw the rest of the campaign, inconsistent form plighted the season but even after the loss of Darren Way and Lee Johnson in January, the club's League One status was confirmed with a game to spare.

Forward Phil Jevons was the club's top goalscorer for the second consecutive season scoring 16 goals, with 15 in the league and one in the FA Cup.

[16] Upon the club's return, they briefly took former Nottingham Forest striker Craig Westcarr on trial,[17] before their first home friendly of the season against Premier League side Portsmouth.

[18] The following day Yeovil traveled to Burgess Hill Town, and a collection of squad players and trialists recorded a 4–0 victory with goals from Stephen Reed, David Poole, Luke Oliver and Scott Guyett.

[32] On 9 August, defender Scott Guyett joined Conference side Aldershot Town on a one-month loan deal,[33] that evening Yeovil drew 0–0 with Rotherham United in their first home match in League One.

[36] Young defender Stephen Reed joined Woking on a short-term loan deal,[37] while Arron Davies scored in a 3–1 victory for Wales under-21s against Malta.

[42] With the transfer deadline looming, Yeovil rejected a bid in the region of £100,000 from Swansea City for the services of Lee Johnson,[43] while defender Michael Rose joined Cheltenham Town on a month's loan deal.

[52][53] On 10 September, Yeovil recorded their second successive win a 2–1 victory over Walsall to move off the foot of the table, with Phil Jevons scoring his first goal of the season.

[59] The game turned out to be the last match at Yeovil for manager Gary Johnson, who left the club to join West Country rivals Bristol City.

[60] Johnson's assistant Steve Thompson took over as caretaker boss and recorded a 1–0 victory in his first match in charge against Port Vale, with summer signing Matt Harrold scoring his first goal for the club.

[65] Thompson celebrated his permanent appointment with a 1–0 victory over league leaders Swansea City, a result which saw Yeovil rise to eighth in the table.

[67] Yeovil then faced two away matches recording a goalless draw against Gillingham,[68] before losing 2–0 to Leyton Orient in the first round of the Football League Trophy.

[72] On 24 October, the club confirmed the departure of Uruguay Alejandro Meloño after his contract terminated by mutual consent having only started two matches.

[74] Yeovil needed a late goal from Phil Jevons to salvage a replay in their FA Cup first round match against League Two side Macclesfield Town.

[86] With the suspension of Weale and injury to third choice keeper Daniel Barker, saw Yeovil sign former Benfica goalkeeper Francisco Ramos on non-contract terms as cover.

[89] After the Barnsley match, Yeovil announced that Argentine striker Luciano Álvarez had returned to Argentina after the club decided not to extend his contract.

[95][96] Three goals from Phil Jevons were enough for Yeovil to record back-to-back victories to begin January, 1–0 away at Doncaster Rovers,[97] and 2–0 at home to Hartlepool United.

[99] Subsequently, on 11 January, midfielder Lee Johnson also left the club for Scottish Premier League side Heart of Midlothian for £50,000.

[104] The end of the month saw the club award youth team graduate Gavin McCallum his first professional contract, the Canada under-20 international signing an 18-month deal.

[111] On 14 February, a dramatic equaliser in the third minute of injury time gave rock-bottom Milton Keynes Dons a 1–1 draw against Yeovil.

[116] A hat-trick from Welsh attacking midfielder Arron Davies earned Yeovil a 3–0 victory away at Chesterfield, on 4 March, to record their first win in seven matches and move out of the relegation zone.

[122][123] On 11 March, Yeovil drew 0–0 with relegation rivals Swindon Town,[124] in the week following the match the club confirmed that Jamie Vincent had joined Millwall on loan until the end of the season.

[126] On 18 March, Yeovil suffered a 1–0 defeat away at AFC Bournemouth,[127] before bouncing back with a comfortable 2–0 victory over Walsall with goals from Matt Harrold and Arron Davies.

[128] On 23 March, Yeovil completed the loan signings of Craig Rocastle from Sheffield Wednesday and midfielder Sam Alsop from Birmingham City.

[131] Yeovil then boosted their survival hopes with a 3–0 victory over Doncaster Rovers with goals from Terry Skiverton, Phil Jevons and Arron Davies.

[138] After a sluggish start to the season, Yeovil's form recovered even after the departure of manager Gary Johnson in September, and confirmed their League One safety with one match to spare.

[140] Despite Thompson wanting to offer him a contract young winger Dale Williams was allowed to leave by Chairman John Fry.

[149][150][151] The club also handed professional deals to three members of their under-18 title winning side Craig Alcock, Thomas Clarke and Jake Smeeton.