2006–07 Football League Trophy

At this point, the two winning finalists face each other in the combined final for the honour of the trophy.

Should the scores be level after 90 minutes, the match entered a penalty shootout phase, with no extra-time being played.

Byes: Blackpool, Chester City, Chesterfield, Crewe Alexandra, Darlington, Mansfield Town, Oldham Athletic, and Port Vale.

Again, there were eight one-legged matches in each section (North and South), with a penalty shootout if a draw occurred after 90 minutes.

The Southern Area final produced the first Bristol derby played in over five years.