The 2006–07 season of the NOFV-Oberliga was the thirteenth season of the league at tier four (IV) of the German football league system.
The NOFV-Oberliga was split into two divisions, NOFV-Oberliga Nord and NOFV-Oberliga Süd.
The champions of each, SV Babelsberg 03 and FC Energie Cottbus II, were directly promoted to the 2007–08 Regionalliga Nord.