The 2008–09 PFC Levski Sofia season included the club's 26th win of the A group of Bulgarian professional football, A Group.

Additionally they competed in the Semi-finals of the 2008–09 Bulgarian Cup, but lost to OFC Pirin Blagoevgrad.

The club made it to the third round of the UEFA Champions League.

The club changed managers from Velislav Vutsov to Emil Velev on 13 August 2008.

See List of Bulgarian football transfers 2008–09 Note: Flags indicate national team as defined under FIFA eligibility rules; some limited exceptions apply.