The draws for the round of 32 were conducted in Sarajevo at 12:00 (CEST) on 6 September 2012 in hotel "Park", Vogošća.
[7] The draws for quarterfinals were done on 30 October at 12:00 CEST in the halls of Football Federation of Bosnia and Herzegovina in Sarajevo.
[8] The draw for semifinals took part after the winter break, on 5 March 2013 at 12:00 CET in the halls of Football Federation of Bosnia and Herzegovina in Sarajevo.
The teams who will play in the finals will be decided by a two-legged fixture with the first leg on 13 March and the second one on 3 April 2013.
Note: Roman numerals in brackets denote the league tier the clubs participate in during the 2012–13 season.
Source: NFSBiH The four winners from the previous round played their opponents in this last hurdle before the final.
Source: NFSBiH Only from quarter-finals and onward selected matches will be broadcast in Bosnia and Herzegovina by BHT1.