The 2012–13 Toto Cup Al was the 29th season of the third important football tournament in Israel since its introduction and the 9th tournament involving Israeli Premier League clubs only.

The Semifinals and the Final were one-legged matches, that were held in a neutral stadium.

The tournament began on 4 August 2012 and ended on 23 January 2013.

Ironi Kiryat Shmona were the defending champions, who made it their second Toto Cup Al title overall.

Ironi Kiryat Shmona first tie was played on 12 December due to their involvement in the UEFA Europa League, with their second leg played on 18 December 2012.