The 2013–14 Estonian Cup was the 24th season of the Estonia's most prestigious football knockout tournament.
Levadia won the competition after they defeated Santos 4–0 in the final.
The draw was made by Estonian Football Association on 18 May 2013, before the 2012–13 final of the same competition.
[3] The draw for the fourth round was made on 15 August.
Levadia got bye to the semi-finals as the eighth quarter-finalist, Tammeka II, was disbanded after the 2013 league season.