Manager Allan Moore and his assistant Mark McNally agreed new one-year deals with the club, whilst experienced pros Martin Hardie and Colin McMenamin were released.

[1] Nine players were offered new one-year deals but David Hutton, Kyle Wilkie and Peter Weatherson were released.

[5] Peter MacDonald was offered a two-year deal by Dundee,[6] and Partick Thistle spoke to Aidan Fulton about a possible move to Firhill.

[19] Former JEF United Ichihara Chiba Reserves midfielder Ryan Hirooka was announced as being at the club on trial.

[21] 12 of the 13 youths offered full-time deals accepted them, with only Christopher McLaughlin opting to sign instead for Dundee United.

[27] Morton brought in three players to train with the squad for pre-season; Dougie Imrie,[28] Marc Fitzpatrick and James Creaney.

[31] Before the friendly with Sheffield United, Morton signed French goalkeeper Nicolas Caraux on a one-year deal.

[35] Morton signed Dougie Imrie from local rivals St Mirren for one season,[36] as well as former Blackburn Rovers youngster Reece Hands on a two-year deal.

[39] Morton were eliminated from the Challenge Cup, 1–0 by Annan Athletic, after a Peter Weatherson free-kick separated the two sides.

[44] The Reserve League fixture list was published on 23 August, with the development squad starting their campaign at Galabank.

[48] Scottish champions Celtic were humbled as Morton progressed to the League Cup quarter final with a 1–0 away victory.

[62] In Hopkin's second match in charge of Morton (the first being a 2–1 defeat at Cliftonhill in November 2002), they were eliminated from the Scottish Cup after a 4–0 thrashing by Inverness.

[66] A selection of trialists including Garry O'Connor and David Robertson played as Morton lost 1–0 to St Mirren at Parklea.

[68] Craig Reid, Jake Nicholson and Stephen Stirling were told they could leave the club at the end of their short-term contracts.

[71] Development squad full-back Glenn Eadie was released by mutual consent after receiving limited playing time in the reserves this season.

[78] Morton's home match against Queen of the South on 25 January was abandoned after a spectator collapsed from a suspected heart attack.

[84] Fouad Bachirou also received his first call-up for the Comoros national football team, and after making his international debut he became the first Morton player to be capped since Paul Fenwick with Canada.