The 2016–17 Navy Midshipmen men's basketball team represented the United States Naval Academy during the 2016–17 NCAA Division I men's basketball season.

The Midshipmen, led by sixth-year head coach Ed DeChellis, played their home games at Alumni Hall in Annapolis, Maryland and are members of the Patriot League.

In the Patriot League tournament, they defeated Holy Cross in the quarterfinals before losing to top-seeded Bucknell in the semifinals.

The Midshipmen finished the 2015–16 season 19–14, 9–9 in Patriot League play to finish in a four-way tie for fourth place.

They defeated Lafayette in the first round of the Patriot League tournament before losing in the quarterfinals to Lehigh.