The 2016–17 Stetson Hatters men's basketball team represented Stetson University during the 2016–17 NCAA Division I men's basketball season.

The Hatters, led by fourth-year head coach Corey Williams, played their home games at the Edmunds Center in DeLand, Florida as members of the Atlantic Sun Conference.

They lost in the quarterfinals of the ASUN tournament to Florida Gulf Coast.

Due to APR violations, Stetson was ineligible for the NCAA tournament, but was eligible for the Atlantic Sun tournament where they defeated NJIT and Lipscomb before losing in the championship game to Florida Gulf Coast.

If Stetson had won, North Florida would have received the conference's automatic NCAA Tournament bid as the regular season champion.