The 2016 season is Associação Portuguesa de Desportos' ninety fourth season in existence and the club's second consecutive season in the third level of Brazilian football.

Portuguesa finished the campaign in 9th position, resulting in relegation to Série D for the first time in its history.

Last updated: 24 September 2016 Source: Match reports in Competitive matches, Soccerway Last updated: 11 September 2016 Source: Match reports in Competitive matches As of 24 September 2016 Source: Match reports in Competitive matches = Number of bookings;   = Number of sending offs after a second yellow card; = Number of sending offs by a direct red card.

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