[4] He works there as an associate professor at the Department of Geology and Geophysics and the School of Environmental Science and Engineering.

He was a postdoctoral Fellow at the Bureau of Economic Geology, Jackson School of Geoscience in 2006–2008 under the supervision of Prof. Bridget Scanlon.

Mukherjee also holds a Professional Diploma in Software Engineering, from National Institute of Information Technology, in 2001.

He researched the subject of groundwater exploration for suitable and sustainable drinking water sources including arsenic and other contaminants.

His research group developed an AI prediction model for detecting groundwater arsenic in the Ganges Delta.