It has become a department at the University of Cape Town (UCT), administered within the School of African and Gender Studies, Social Anthropology and Linguistics.
Key among these were Elaine Salo, Sisonke Msimang, Jane Bennett, Jennifer Radloff, and Yaliwe Clarke in South Africa, Charmaine Pereira in Nigeria, Sylvia Tamale and Ruth Ochieng in Uganda, Takyiwaa Manuh and Akosua Ampofo in Ghana, and many others.
Faced with budget cuts and shifting institutional support, the AGI found itself split from the project of Gender Studies at UCT.
These efforts were generally successful, and in 2017, Yaliwe Clarke took over the directorship of the AGI with new agendas for strengthening black, queer and African work especially among young women.
From 2008 on, under the new directorship of Jane Bennett, programmes on sexuality and reproductive justice were strengthened while other AGI threads were simultaneously developed by a very strong team, including Yaliwe Clarke working on women's peace activism with Ruth Ochieng of ISIS-Wicce in Uganda.
The teaching programmes within the University of Cape Town grew strongly, and partnerships were built with Barnard College in New York, the Gino Germani Institute in Buenos Aires, and CODESRIA in Senegal.