On 28 May 1989, Andirá took part in the first ever professional Campeonato Acreano match, losing 1–5 to Rio Branco at Estádio José de Melo.

[3] The Morcego didn't fare well in the 1989 season, finishing dead last after losing nine of ten games and scoring just one point overall, following a goalless draw with Atlético.

The following years, the Morcego were a mainstay in the bottom of the Campeonato Acreano table, more often than not failing to win a single game.

After defeating Grêmio 2–0 on 23 July 1995, Andirá had a winless streak that lasted more than two years, ending with a 4–3 victory over Atlético on 1 August 1997.

Andirá once again failed to win a single match during the 2010 season, which saw the team getting relegated for the first time in club history.

The Morcego quickly found their way back to the top tier of the state league, claiming the second division title in 2011.