The airport handles QantasLink flights to Sydney and is a base for Ambulance Victoria's HEMS 3 helicopter.

In 2017, Bendigo Airport was upgraded with a new 1.6 km north-south runway, new taxiway system, new lighting and signage.

[3] The flights operated for 12 months before being suspended in March 2020 due to the COVID-19 pandemic.

[5] In 2022, construction on a new terminal building commenced with the works to deliver a new, larger building with a check-in foyer, cafe, departure gates and provision for a security screening area.

[8] Bendigo Airport has a modern terminal building which is located on the western side.