The station is managed by Great Western Railway, who provide services on the North Downs Line from Reading to Redhill and Gatwick Airport.

All services at Blackwater are operated by Great Western Railway using Class 165 and 166 DMUs.

[citation needed] The typical off-peak service is two trains per hour in each direction between Reading and Gatwick Airport via Guildford.

During the late evenings, the service is reduced to hourly in each direction.

[citation needed] Stagecoach South route 3 serves the station providing connections to Yateley, Camberley and Aldershot.