At the end of the year, the team went bankrupt and the new club was placed in Eccellenza.

In the 2004–05 season of Eccellenza Apulia, Brindisi placed second, qualifying for the national playoffs.

The team won its two rounds in the playoffs, thus winning promotion to Serie D. For the next 4 season, the team played in Serie D. In the 2008–09 season, Brindisi clinched first place in Girone H, thus gaining direct promotion to Lega Pro Seconda Divisione.

The club is restarted in Serie D with the new denomination of Società Sportiva Dilettantistica Città di Brindisi.

Note: Flags indicate national team as defined under FIFA eligibility rules; some limited exceptions apply.