The club has been based at two of these facilities, originally at in the northern Melbourne suburb of Bundoora, and later at the Casey Fields sports precinct in Cranbourne East.

The site was situated within the La Trobe University precinct.

[1] Constructed in late 2014 for approximately $15 million Australian dollars, the City Football Academy has served as the Asia-Pacific base for the City Football Group company and since the opening in February 2015 has provided tenant club Melbourne City with some of the best facilities of any A-League club.

[2] The Academy included an elite level physiotherapy, rehabilitation and medical facilities, a club administrative office and multiple football pitches including a $2 million DESSO hybrid artificial surface.

[3] In December 2016, the club unveiled the Elite Women's Facility, an extension of the complex providing dedicated warm-up, training, locker and lecture rooms for the women's team.