[5] After the release of the Terrigen Mist, Storm, Iceman and Magik have decided to leave the Westchester and establish X-Haven in the Limbo dimension.
Before leaving they try to recruit old friends: Colossus, living quietly in Russia; Nightcrawler, recently abducted; and Jean Grey, who is attending college.
Storm, Ice Man, Anole, Glob Herman, Ernst, and Cerebra (who is implanted into a Sentinel) try to defend, while Forge creates a failsafe shield.
She then meets with Old Man Logan and convinces him that since he is from a different timeline he won't kill the X-Men in this dimension and she'll do whatever she can to protect him from himself.
After the battle, Storm announces that the X-Men are opening X-Haven to any mutant seeking sanctuary from the Terrigen Mist, and mean no harm to humans or inhumans and will also be there to help them if needed.
[6] After a successful mission in the Savage Land to rescue Sunfire, Storm gives Colossus permission to train a team of students for battles.
[8] Cerebro then discovers 600 mutant signatures, called the Ark, in Tokyo and agrees to send Colossus and this young team to investigate.
Storm and the Extraordinary X-Men quickly follow, but the one minute delay turns into 12 months difference in the future time line, called Omega World.
[9] Glob, No-Girl, Ernst, and Anole have been on the run from the new Horseman of Apocalypse: Colossus, Deadpool, Moon Knight, and Venom.
Wolverine gets absorbed by Venom and the rest of the team deal with the Horseman, so Storm and Nightcrawler teleport into the temple to find the genomes.
[10] Magik finally rejoins them but – after finding that her protege, Sapna, is fated to destroy the X-Men – subdues Colossus and returns them home.
They end up in a war-torn realm, ambushed by a team of mystics who assume that Magik and Storm are servants of a being known as the World Eater.
[13] Magik reopens the portal so she and Storm can convince the mystics who attacked them earlier to help them stop Sapna and the World Eater before it consumes Limbo.
[14] The X-Men all try unsuccessfully to thwart the invasion and Magik and Storm combine powers with the mystics to open a portal straight to X-Haven.
The child's death convinces Storm to lead the X-Men into war against the Inhumans since there isn't a cure to save mutants from the Terrigen.
Magik discovers that while her soul is stuck inside of her sword, her body is frozen in the real world and susceptible to attack.
With X-Haven now completely vacated, Storm wonders how to move the X-Men forward and feels guilty for leading them to war when they could have found a diplomatic solution.