During the 1990 season the club played in the Soviet Second League, zone "East", finishing in 4th position.

The best club performance in Oliy League is runners-up of 1994 season after Neftchi Farg'ona.

FK Bukhoro played three times in semi-final of Uzbek Cup.

After the 2013 season had finished, on 10 November 2013 Edgar Gess became new head coach of Bukhoro, replacing Tachmurad Agamuradov in this position.

Note: Flags indicate national team as defined under FIFA eligibility rules; some limited exceptions apply.