In 2006, the club laid an artificial coverage stadium in Trakai[2] and started to play in the III Lyga Vilnius County.

The club also reached the semi-finals of the 2013–14 Lithuanian Football Cup, before being eliminated by the eventual winners, VMFD Žalgiris.

[4] The club began preparation for the 2014 campaign by strengthening their first team, which included signing Lithuanian national team veterans, Paulius Grybauskas, Vytautas Lukša, Darius Miceika, and Tadas Labukas, as well as unveiling former star Edgaras Jankauskas as their new head coach.

[7] Throughout the season, the club's results plateaued, but they managed to climb up to second place around the mid-season break.

On 2 July 2015, FK Trakai debuted in the UEFA Europa League qualification round against HB Torshavn from the Faroe Islands.

But the team managed to keep last season's leaders, Yuri Mamaev, Marius Rapalis, and Deividas Česnauskis.

The team signed a legionnaire from Italy, Mattia Broli, and former Lithuanian national football players, Arūnas Klimavičius, and Martynas Dapkus.

In May, Oleg Vasilenko was fired,[16] and Kibu Vicuña was hired as the team's head coach.

[17] He worked with the team during the second half of the 2018 A Lyga season and in the 2018–19 Europa League qualification rounds, in which Trakai managed to beat Welsh club Cefn Druids and Kazakh side FC Irtysh Pavlodar to reach the third qualification round, but then lost against Serbian team FK Partizan.

Vicuña left Trakai in October to join Polish side Wisła Płock.

In the 2019 Lithuanian Football Cup, the club reached the round of 16, where they lost on penalties against FK Kauno Žalgiris.

[24] But only one month later, on 28 June, Riteriai suffered a devastating 0–7 defeat against FK Žalgiris,[25] which lead to the resignation of manager Čepas.

[28] In the 2020 Lithuanian Football Cup, Riteriai reached the semi-finals, where they were defeated 0–4 by FK Panevėžys.

Prior to his departure, the team dropped to sixth place in A Lyga after earning only two points in the last five matches under Gurenko.

After a poor start to the 2023 season with only one point out of the first four league matches, Villar was sacked on 24 March 2023.

[38] In the 2023 Lithuanian Football Cup, Riteriai reached the quarter-finals, where they were defeated 0–2 by FA Šiauliai.

FK Riteriai run their own football academy, which keeps close relationship with AC Milan.

Note: Flags indicate national team as defined under FIFA eligibility rules; some limited exceptions apply.

Players who have either appeared in at least one match for their respective national teams at any time or received an individual award while at the club.