[7] The MTA announced in December 2021 that it would install wide-aisle fare gates for disabled passengers at five subway stations, including Flushing Avenue, by mid-2022.

[9][10] Also, in December 2021, the MTA awarded a contract for the replacement of the Flushing Avenue station's elevators, to be completed by late 2023 or early 2024.

The center track is used by the J and Z trains in the peak direction weekday midday and rush hours.

One is located at an elevated station house beneath the tracks, which has two staircases from either southern corners of Flushing Avenue and Broadway, token booth, turnstile bank, a waiting area that allows a free transfer between directions, and a single staircase to each platform at their extreme north end.

[17] Three elevators were installed in Fall 2003 to make this station ADA accessible due to its proximity to Woodhull Hospital.