The Harry Brookes Allen Museum of Anatomy and Pathology continues to be a valuable resource for students studying medicine and related anatomical disciplines.
Dr Charles James Martin who was subsequently to have a distinguished career in Europe had been appointed lecturer in physiology in 1894 and Allen encouraged him in every way, eventually recommending that he should be given the title of acting professor.
In the same year there was a strong difference of opinion as to whether the proposed Institute of Tropical Medicine should be established at Sydney or Townsville, Queensland.
In 1908, Allen was elected president of the Australasian medical congress held in Melbourne, an honour he highly valued.
With the coming of World War I, Allen quickly realized that his students would do more valuable work by remaining and completing their courses than by enlisting as combatants.
Allen drafted a new medical curriculum in 1921, which was adopted, but he fell ill in 1923, and though he recovered temporarily, a serious cerebral haemorrhage so incapacitated him that he was obliged to give up his chair.
An elder brother, George Thomas Allen, C.M.G., held a distinguished position in the Commonwealth public service.
He was not without vanity, lacked humour, and made comparatively few close friends; but there was an immense earnestness in his character, and a constant striving for the best, which commanded respect.
His post-mortem demonstrations were models of their kind; he was ambidextrous and showed absolute control of the materials, complete knowledge, and had a burning desire that the students should understand everything that could be learned from the particular subject.
His lectures were concise and orderly, consistently keeping a very high level of instruction, and his department was run with tact and efficiency.
George Britton Halford had laid the foundations, and considering his manifold duties had done remarkable work, but it fell to Allen to develop a really great medical school at Melbourne.
Another of his monuments is The Walter and Eliza Hall Institute of Medical Research which, as the memorial plate to Allen at the Royal Melbourne Hospital states, owes its origin to his inspiration.