Indonesia participated in the 2006 Asian Games held in the city of Doha, Qatar from 1 December 2006 to 15 December 2006.

Indonesia ranked 20th with 2 gold medals in this edition of the Asiad.

[1] Men Women Men Team Individual Women Team Individual Mixed Men Men * Syafrizaldy originally won the bronze medal, but Sayed Faisal Husain of Bahrain the original silver medalist was disqualified after he failed the drug test.

[2] Men Women

Men Women Men Women Mixed Men Men Women Keirin Pursuit Omnium Round 1 Men Men Women Men Women Men Men Men Women Women Men Women Men's Taolu Women's Taolu