[6] Kye Gompa is said to have been founded by Dromtön (Brom-ston, 1008–1064 CE), a pupil of the famous teacher, Atisha, in the 11th century.

[7][8] In the mid-17th century, during the reign of the Fifth Dalai Lama, Kye was extensively plundered and damaged by the Mongols, and became a Gelugpa establishment.

[10] In the 1840s, it was ravaged by fire and, in 1975, a violent earthquake caused further damage which was repaired with the help of the Archaeological Survey of India and the State Public Works Department.

[citation needed] Kye monastery has a collection of ancient murals and books, including Buddha images.

In recent times the monastery has also hosted the "Kachen Dugyal Memorial Old Aged – Handicapped Society" which provide accommodation for a number of elderly and disabled people.