It was serialized in Shueisha's seinen manga magazine Weekly Young Jump from October 2019 to March 2023, with its chapters collected in twelve tankōbon volumes.

Written and illustrated by Nene Yukimori, Kubo Won't Let Me Be Invisible was serialized in Shueisha's seinen manga magazine Weekly Young Jump from October 24, 2019,[7] to March 2, 2023.

[11] The series is simultaneously published in English and Spanish on Shueisha's Manga Plus service and Viz Media's Shonen Jump website.

Cy Catwell of Anime Feminist, reviewing the first episode, compared the series to Komi Can't Communicate and Don't Toy with Me, Miss Nagatoro, saying that Kubo loves teasing Junta as a "form of mild bullying/flirting," noted the tender moments, nice simplicity, and called it cute romance between teenagers at its core, but expressed uneasiness with "Junta’s discomfort with Kubo’s actions" and did not recommend the series.

He argued that the series does not challenge genre conventions, but is a "quiet comedy built entirely around the dialogue and chemistry of our two leads," with humble and casual ambitions, calling it "pure fluff," sweet, and funny, approaching the "realm of iyashikei in its most atmospheric moments," praised Shiraishi for becoming more relatable, and said the series was charming, craftful, and a "rewarding experience if you can vibe with its mellow energy.