She saw limited playing time as a winger in the fall of 2020 before being converted to center back for the 2020 NCAA tournament and started in that position for the rest of her college career.
[5] After being national runners-up to Santa Clara, Flynn helped Florida State return to the final of the 2021 NCAA tournament and win the championship.
[8][9] During the 2023 season, Flynn played in the attack for her senior night game versus NC State, scoring a hat trick to double her career goal total.
[13] A month later, she won the vote for NWSL Save of the Week for her header to block a shot on goal from Temwa Chawinga in an eventual 1–0 loss to the Kansas City Current on May 25.
[14] However, her rookie season ended prematurely on August 28, when she was placed on the season-ending injury list after being diagnosed with bilateral compartment syndrome in her lower legs, for which her club said she would undergo surgery.