In addition to the Jonathan regime's alienation of Basotho powerbrokers and the local population, South Africa had virtually closed the country's land borders because of Lesotho support of cross-border operations of the African National Congress (ANC).
Moreover, South Africa publicly threatened to pursue more direct action against Lesotho if the Jonathan government did not root out the ANC presence in the country.
Lekhanya accused those involved of undermining discipline within the armed forces, subverting existing authority, and causing an impasse on foreign policy that had been damaging to Lesotho's image abroad.
Lekhanya announced the establishment of the National Constituent Assembly to formulate a new constitution for Lesotho with the aim of returning the country to democratic, civilian rule by June 1992.
The main LLA force was wiped out in 1979 but later recruits were assisted by a Transkei-based American mercenary with Rhodesian army service, Major Bob MacKenzie, son-in-law of the former CIA deputy-director, Ray Steiner Cline, a former member of the 1969 Nixon administration.
On 20 January 1986, a military coup led by Major General Justin Metsing Lekhanya, under pressure both from Pretoria and the Leballo faction of the Pan Africanist Congress, deposed the Jonathan government.