The country's national team which was directly under the auspices of the Philippine Sports Association for the Differently Abled—National Paralympic Committee (PHILSPADA-NPC) competed in the inaugural edition of the ASEAN Wheelchair Basketball Championship in 2003 where it had a second-place finish.

[4][5] The Wheelchair Basketball Federation of the Philippines was established in 2019 as part of the Philippine Paralympic Committee's plan to have a National Para-Sport Associations (NPSAs) for parasports, or the equivalent of the National Sport Associations (NSAs) of the Philippine Olympic Committee which handles abled-bodied sports.

The Philippine national team went in Thailand to compete in the Asia-Oceania qualifiers for the 2020 Summer Paralympics using wheelchair bought days prior to the tournament.

They planned to compete in the 2020 ASEAN Para Games at home which was later cancelled due to the COVID-19 pandemic.

The Philippines men team has not competed at the Wheelchair Basketball World Championship or at the Summer Paralympics.