However, the early demise of the king's eldest son Ekoji II who died after ruling Thanjavur for a year and a period of anarchy which followed thrust Pratap Singh on the forefront of palace intrigues.
However, in spite of his poor health, Ekoji offered a determined resistance to Chanda Sahib who invaded Thanjavur during the former's short reign and forced him to retreat to Tiruchirapalli.
Sayyid, the Governor of the Thanjavur Fort, rose into prominence during this period as a kingmaker and actively participated in court intrigues promoting one puppet ruler after another to the throne.
In February 1739, Chanda Sahib forced Shahuji to cede Karaikal to the French and in April, the Raja confirmed the Grant.
The Dutch East India Company based at Nagapattinam sent home the following report on the events at Thanjavur: Chanda imprisoned Shahuji Maharaj in Tanjore under a pretext that he was not of royal blood.
As soon as Pratapsinha ascended the throne he had to contend with the intrigues of the pretender Shahuji in the company of a treacherous Maratha noble Koyaji Kattigai.
In 1748, the pretender Shahuji sent an envoy, first to Puducherry[3] and then to Fort St. David to negotiate terms of alliance with the French East India Company.
[3] The British East India Company initially supported Pratapsingh but switched sides when Shahuji offered the fort of Devikottai at the mouth of the Coleroon river.
[6] However, the confederacy broke when Nanja Raja realized that he had been deceived by Muhammad Ali who had promised to give him Tiruchirapalli as per an early arrangement.
From the onset, the Nawab of Carnatic Muhammad Ali Khan Wallajah wasn't in good terms with Pratap Singh and desired to annex Thanjavur.
Actively supported by the Tondaiman of Pudukkottai, Manoji once led a large army into the territory of the Sethupathy of Ramnad and even captured Aranthangi.
The Nawab of Carnatic who was the actual overlord to whom Thanjavur paid tribute, stepped in and stopped the Raja from pursuing further hostilities.