His return to Tirana did not last as he signed for Kastrioti Krujë in 2006, where he would stay for the next two seasons until the club was relegated to the Albanian First Division.
He returned to the capital in the summer of 2008 with Partizani Tirana but only played for the first half of the 2008–09 season, as the club was in turmoil.
He left Partizani joined Kastrioti once again in January 2009, helping the club win promotion to the Albanian Superliga.
[2] On 30 September 2016, during the league match against the rivals Skënderbeu Korçë, which finished in a goalless draw, Kalari received a controversial 61st minute red card after a tackle on Liridon Latifi.
[3] Later on 27 May, he scored his first Partizani goal in the final matchday of 2016–17 season against the same opponent, netting a free-kick in an eventual 2–2 draw, which was enough for the team to clinch the second position.