On January 21, 2014, Comegy was introduced as the head coach at Mississippi Valley State.
[2] He was named JSU head coach on December 9, 2005 after ten years as head coach of Tuskegee University, where he compiled a 90–26 record.
He has also served as head coach of Cheyney University and Central State University, where he won the NAIA national football championship in 1995.
He served as an assistant coach at Central State under former Billy Joe in the 80s and 90s.
[3] Comegy is a 1976 graduate of Millersville University and has held coaching positions at Millersville and Colgate University, where he also coached track and baseball.