Despite being unable to participate in the pre-season cup due to visa problems, Lynch wasted no time in making an impact for his new team and quickly made a name for himself in round 1 in his debut game scoring the first goal in Queensland's 3-nil win over Perth Glory.
He continued his hot-form and was quickly become a crowd favourite of the Queensland Roar faithful when he scored the winner against the Newcastle Jets with just seconds remaining.
He formed a deadly partnership with Reinaldo and Ante Milicic in the opening nine rounds until he suffered a hamstring injury which kept him on the sidelines for a long period of the season and this huge blow saw the Roar lack in attack, spark and goals which slowly brought them down and out of the top four.
While the 2007–08 Season was approaching, Lynch had showed impressive form scoring three times in four matches including a superb goal in Queensland Roar's 4–1 win over SuperSport United in a friendly at Suncorp Stadium.
After having surgery during the off-season, Lynch had shown mountains of confidence and was looking forward to continue his solid form come the start of the third A-league season.