Trzebnica itself was first mentioned in an 1138 deed, then held by the Polish voivode Piotr Włostowic and later seized by the Silesian duke Władysław II the Exile.
In 1202 Władysław's grandson Duke Henry I the Bearded and his wife Hedwig of Andechs founded a Cistercian convent, present-day Sanctuary of St. Jadwiga in Trzebnica, the first in Poland.
After Duke Henry died in 1238 and was buried in the church, his widow moved to the Cistercian convent which by now was led by her daughter.
In 1250 Trzebnica received town privileges, it passed under the jurisdiction of the Lower Silesian Duchy of Oleśnica in 1323, a Bohemian fief from 1328.
During the Thirty Years' War, the town was plundered by Swedish forces and the nuns had to flee across the border to nearby Poland.
In 1870 the Order of Saint John acquired the former abbey's estates to establish a hospital, cared for by the Sisters of Mercy of St. Borromeo up to today.