The 2006 Western Illinois Leathernecks football team represented Western Illinois University as a member of the Gateway Football Conference during the 2006 NCAA Division I FCS football season.
They were led by eighth-year head coach Don Patterson and played their home games at Hanson Field in Macomb, Illinois.
The Leathernecks finished the season with a 5–6 record overall and a 2–5 record in conference play, placing sixth in the Gateway.
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