The 2016–17 Pepperdine Waves women's basketball team represented Pepperdine University in the 2016–17 NCAA Division I women's basketball season.

The Waves, members of the West Coast Conference, were led by fourth year coach Ryan Weisenberg.

The Waves played their home games at the Firestone Fieldhouse on the university campus in Malibu, California.

They lost in the first round of the WCC women's tournament to Pacific.

He finished at Pepperdine with a 4 year record of 28–94.