The club included future Major League Baseball All-Stars Jim Bouton, Joe Pepitone, and Mel Stottlemyre.

With a roster that included Billy Wynne, Don Shaw, Tug McGraw, and Jerry Koosman, the club won the league championship three times: in 1962, 1964, and 1966.

Future major leaguers Luis Aguayo, Randy Lerch, Dickie Noles, Lonnie Smith, and Ozzie Virgil, among numerous others, played for the team.

The team once again operated as a co-op and received 17 players from the Cleveland Indians and several from the Los Angeles Dodgers.

The squad featured future MLB player Jack Fimple and finished fourth in the New York–Penn League's West Division with a 29–45 record.

In 1991, with John H. Graham as general manager,[8] the team set the all-time attendance record at Falcon Park.

In 1998, the Doubledays and the Oneonta Yankees were named co-champions of the New York–Penn League after Central New York was hit with a torrential rain storm and the fields at both parks were deemed unplayable.

After losing in the first round of the playoffs for the first three years of their streak, they advanced to the New York–Penn League championship series before being swept by the Staten Island Yankees.

The Doubledays finally won the NYPL title in 2007, sweeping the Brooklyn Cyclones in the league championship series.