Napoléon Bonaparte, as First Consul, formally approved the expedition "to the coasts of New Holland",[1] after receiving a delegation consisting of Baudin and eminent members of the Institut National des Sciences et Arts on 25 March 1800.
Because of delays in receiving his instructions and problems encountered in Isle de France (now Mauritius) they did not reach Cape Leeuwin on the south-west corner of the continent until May 1801.
The expedition was severely affected by dysentery and fever, but sailed from Timor on 13 November 1801, back down the north-west and west coast, then across the Great Australian Bight, reaching Tasmania on 13 January 1802.
The expedition then began surveying the south coast of Australia,[3] but then Captain Jacques Felix Emmanuel Hamelin in Naturaliste decided to make for Port Jackson (Sydney) as he was running short of food and water, and in need of anchors.
En route, in April 1802, Hamelin explored the area of Western Port, Victoria, and gave names to places, a number of which have survived, for example, Ile des Français is now called French Island.
Baudin sailed on to the Nuyts Archipelago, the point reached by the Dutch ship 't Gulden Zeepaert in 1627, before heading for Port Jackson as well for supplies.
[5] Naturaliste took with her the Colony's staff surgeon, Mr. James Thomson, whom Governor Philip Gidley King had given permission to return to England.
[6] Before resuming the voyage Baudin purchased a 30 ton schooner, which he named the Casuarina, a smaller vessel which could conduct close inshore survey work.
According to researchers from the University of Adelaide, during this expedition Baudin prepared a report for Napoleon on ways to invade and capture the British colony at Sydney Cove.
Both were eventually promoted to Lieutenant, and Louis was later given command of the schooner Casuarina, purchased in Sydney to enable improved inshore surveying.