The partnership ended in 2000 and the team reverted their name to Smena Minsk.
In early 2006 a new senior professional team FC Minsk was founded on the basis of Smena.
Minsk-2 was reformed again in 2012 as a ground for Minsk football academy graduates.
After finishing the season at 5th place, Minsk-2 was invited to join First League as a replacement for disbanded DSK Gomel.
In early 2015, FC Minsk announced that their farm-club Minsk-2 was folded.