She is the sixth ship of the class to enter service.

She was laid down in August 2008 by Howaldtswerke, Kiel, launched in February 2013 and commissioned on 10 October 2016.

The commissioning ceremony took place at Eckernförde in the presence of the Deputy Inspector of the Navy and Commander of the Fleet and Support Staff, Vice-Admiral Rainer Brinkmann, the Minister of the Interior and Federal Affairs of the State of Schleswig-Holstein, Stefan Studt, the head of the Schleswig-Holstein State Chancellery Thomas Losse-Müller, and the commander of Einsatzflottille 1 Jan Christian Kaack.

In January 2015 Der Spiegel reported that significant problems had been found with U-36 and her sister submarine U-35.

The drive shaft system, battery, radar and the radio buoy were all found to be malfunctioning.