In addition to magnet programs the school also offers 30 AP courses, and a wide variety of fine arts, and diverse academic electives.

Many of Jupiter High School's clubs have competed and won at State and National levels such as: lacrosse, rugby, softball, baseball, flag football, debate, drama, the competitive robotics team, state-ranked marching band, and the nationally ranked table tennis team.

[6] The Winterguard won 4th place in class Elite A at the 2015 Winter Guard International championships in Dayton, Ohio.

In 2023 the JHS chorus was selected to perform at Disney's candlelight service at epcot in Orlando Florida.

For the 2011–2012 school year, Jupiter High has been elected President of the Palm Beach County Association of Student Councils.