It was during this period that he started riding the European Winter 'Six-Day' circuit and won the silver medal in the Madison at the World Championships.

In 1999–2000 he rode for Team Gerolsteiner and cemented himself as one of the top Six Day riders in the world, and also continued competing as a Road Professional.

After the Mapei team finished at the end of 2002 Scott concentrated on the Six Days until injury and illness eventually saw him retire early in 2005.

Scott spent 2007 as the Manager of the Drapac Porsche Cycling Team, in 2008 he joined the Victorian Institute of Sport as a coach.

He is the host of the Australian television program Full Cycle which broadcasts on the Nine Network and Fox Sports across Australia.