Note: The "final" team standings were adjusted when La Salle forfeited its games after the season was over.

The system gives 15 points to the champion team of a UAAP event, 12 to the runner-up, and 10 to the third placer.

The University has offered to return the 2004 championship and 2005 runner-up trophy and file a leave of absence from the league.

In its meeting on April 21, 2006 in Adamson University, members of the UAAP Board unanimously decided to suspend DLSU in all sports events of the UAAP for the entire 2006–2007 season as a consequence of the university's negligence and inaction against the two ineligible players.

If the forfeited games are factored in, the final elimination round standings is: All of La Salle's victories in the playoffs were also forfeited; if La Salle won the 2005 title, they would've surrendered back the trophy to the finals opponents, FEU.