1 The champions of Congo DR, South Africa, Sudan, and Tunisia were not given byes in the first stage although the runners-up were.

The third-placed Egyptian side, Al-Zamalek were not allowed to replace them as the CAF Champions League regulations allow only national champions and runners-up to compete.

1 Played over one leg after first leg cancelled due to political violence in Madagascar[2] Two federations inscribed their clubs after the deadline, but were admitted for an intermediate round.

As no side withdrew from the first round, Akonangui were effectively eliminated as well.

The draw for the group stage was held on 7 May in CAF headquarters in Cairo.