[2] In 1977, he was transferred to the Rwandan Superior Military School (École Supérieure Militaire), where he taught courses as well as commanding a group of trainees.
[2] Along with his military duties, Ndindiliyimana served in numerous ministerial positions in the Rwandan government beginning in February 1982 when he was appointed as the Minister of Youth and Sports.
[2] Several senior Belgian military officers helped Ndindiliyimana travel and eventually arrive in Belgium and obtain temporary refugee status.
[5] In 1996 the Belgian Commission on Refugees denied his official request for asylum due to "serious reasons to think that the subject committed crimes against humanity" but the ruling was overturned two years later by a review panel.
Following the death of President Habyarimana, Ndindiliyimana was one of the senior FAR officers to serve on the Crisis Committee, along with Théoneste Bagosora and Tharcisse Renzaho.
Dallaire writes that he "had always found his [Ndindiliyimana's] loyalties an enigma" and initially assumed he represented a moderate voice in the crisis committee which was correct.
Dr. Alison Desforges testified at his trial in November 2006 that Ndindiliyimana was opposed to genocide, and acted to stop killings and was himself threatened because he had Tutsi officers and men in his close protection escort.
The ICTR ordered his release but Ndindiliyimana was unable to return to his home in Belgium and was forced to stay in a UN safe house in Arusha, Tanzania.
[8] In late September, 2014 the Belgian government permitted his return to Belgium to rejoin his family after almost 15 years in detention in Tanzania.